Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015911986.1_cds_XP_016461964.1_55237
CDS Infomation

[gene=LOC107785228] [db_xref=GeneID:107785228] [protein=3-oxoacyl-[acyl-carrier-protein] synthase II, chloroplastic-like] [protein_id=XP_016461964.1] [location=complement(join(85845..85961,86345..86404,87100..87180,87273..87427,87920..88004,88147..88215,88375..88454,88533..88578,88739..88834,88926..89036,89133..89336,89410..89615,90834..91032))] [gbkey=CDS]
Sequence

ATGTCTGCATCGACTGTATCGTCATGGTCAATAGCTGCATGCATGTCAGCTGCTTGTGAA
AATGAGCAAGAGAAGAATTTTTTTAATAGGAATAAGACTTGCAATGGCTTTTCATTTTCC
AATTCTTGTTTAGTGAAAAATGAGTATTCTTCACTCTTTGGATGTTGGAGGAGTAAACAC
AGGCGCAATCCCACTTCAGGTGGCATAAGGGCTGTTGCTGTACAACCAGTTATGGAAGTC
ACATCAAAGAAGAAATCGCCAACCAAGGAAAGGCGAGTGGTTGTGACCGGGATGGGGGTG
GTCACGCCGATTGGTCATGACCCCGATTTGTTCTATGAAAACCTGCTCCAAGGTGTCAGT
GGCATAAGCGAGATAGAAGCTTTTGATTGTTCGCCTTTTCCAACAAGAATTGCTGGAGAA
ATCAAGTCTTTCTCGACTGCTGGCTGGGTTGCGCCTAAACTTTCGAAAAGAATGGACAAG
TTCATGCTTTACATGTTAACAGCTGGTAAGAAGGCGTTATCAGATGGCGGAATTACTGAA
GACGTAATGGAAGAATTGGATAAAACAAAATGTGGAGTTTTGATTGGCTCTGCTATGGGT
GGGATGAAGGTCTTCAATGATGCAATAGAATCCTTAAGGATTTCTTATAAGAAGATGAAT
CCTTTTTGTGTACCATTTGCCACTACAAACATGGGCTCTGCGATGCTTGCCATGGACTTG
GGATGGATGGGTCCAAATTATTCAATTTCAACAGCATGTGCGACGAGCAACTTCTGCATA
TTGAATGCTGCTAACCATATCATTAGAGGTGAAGCTGATGTGATGCTCTGTGGTGGATCA
GATGCAGTAATTATACCGATTGGATTGGGAGGATTTGTTGCATGCAGAGCGCTTTCCCAG
AGAAATAGTGACCCTACTCGAGCTTCTCGGCCTTGGGATAGTAATCGTGATGGATTTGTC
ATGGGTGAAGGAGCTGGAGTCCTGCTTTTGGAAGAACTTGAGCATGCCAAGAGAAGAGGT
GCAACTATCTATGCTGAATTTCTTGGTGGAAGCTTTACTTGTGATGCTTATCACATGACA
GAGCCTCATCCTGAAGGAACCGGCGTTATCTTATGCATAGAGAAGGCCTTAGCTCAGTCT
GGTGTATCCAAGGAAGATGTGAACTATATTAATGCACATGCCACTTCTACACCGGCAGGG
GATCTCAGAGAGTACCAAGCTCTTGTACATTGTTTTGGTCAGAACCCAGAGTTACGAGTG
AACTCTACGAAGTCTATGATCGGTCACCTGCTAGGCGCTGCTGGTGCTGTCGAGGCAGTA
GCAACTGTTCAGGCAATACGAAGTGGATGGGTTCATCCAAATATAAATCTTGAAAACCCA
GAAGAGGGTGTGGATACAAATTTACTCGTGGGTGCCAAAAAAGAAAGATTGGATATTAAG
GTGGCACTATCTAATTCATTTGGATTTGGCGGCCATAATTCGTCGATCTTATTTGCCCCT
TACAAGTAG

Peptide Sequence

PEP ID

XP_016461964.1
PEP Infomation

PREDICTED: 3-oxoacyl-[acyl-carrier-protein] synthase II, chloroplastic-like [Nicotiana tabacum]
Sequence

MSASTVSSWSIAACMSAACENEQEKNFFNRNKTCNGFSFSNSCLVKNEYSSLFGCWRSKH
RRNPTSGGIRAVAVQPVMEVTSKKKSPTKERRVVVTGMGVVTPIGHDPDLFYENLLQGVS
GISEIEAFDCSPFPTRIAGEIKSFSTAGWVAPKLSKRMDKFMLYMLTAGKKALSDGGITE
DVMEELDKTKCGVLIGSAMGGMKVFNDAIESLRISYKKMNPFCVPFATTNMGSAMLAMDL
GWMGPNYSISTACATSNFCILNAANHIIRGEADVMLCGGSDAVIIPIGLGGFVACRALSQ
RNSDPTRASRPWDSNRDGFVMGEGAGVLLLEELEHAKRRGATIYAEFLGGSFTCDAYHMT
EPHPEGTGVILCIEKALAQSGVSKEDVNYINAHATSTPAGDLREYQALVHCFGQNPELRV
NSTKSMIGHLLGAAGAVEAVATVQAIRSGWVHPNINLENPEEGVDTNLLVGAKKERLDIK
VALSNSFGFGGHNSSILFAPYK

Transcript Sequence

Gene sequence data has not been registered.